iTRAQ-based proteomic analysis provides novel insight into the postnatal testicular development of Hu sheep

Pei, Shengwei; Luo, Jing; Weng, Xiuxiu; Li, Fadi; Li, Wanhong; Yue, Xiangpeng; Xu, Yanli; Bai, Jingjing; SCI

机构： Lanzhou Univ, Minist Educ, Engn Res Ctr Grassland Ind, State Key Lab Herbage Improvement & Grassland Agro, Lanzhou 730020, Peoples R China; Xinjiang Acad Anim Sci, Inst Anim Husb Qual Stand, Urumqi 830057, Peoples R China; Anim Husb & Vet Extens Stn Wuwei City, Wuwei 733000, Peoples R China;

关键词： Sheep; Proteomic; Testicular development; Fertility

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Transcriptome and Metabolome Integration Provides New Insights Into the Regulatory Networks of Tibetan Pig Alveolar Type II Epithelial Cells in Response to Hypoxia

Yang, Yanan; Yuan, Haonan; Liu, Xuanbo; Wang, Zhengwen; Jiao, Ting; Cai, Yuan; Zhao, Shengguo; Li, Yongqing; Ren, Yue; Gao, Caixia; Jiao, Ting; SCI

机构： Gansu Agr Univ, Coll Anim Sci & Technol, Lanzhou, Peoples R China; Xinjiang Acad Anim Sci, Urumqi, Peoples R China; Inst Anim Husb & Vet Med, Acad Agr & Anim Husb Sci, Lhasa, Peoples R China; Chinese Acad Agr Sci, Harbin Vet Res Inst, State Key Lab Vet Biotechnol, Harbin, Peoples R China; Gansu Agr Univ, Coll Grassland Sci, Lanzhou, Peoples R China;

关键词： hypoxia; ATII cells; swine; MAPK pathway; mRNA-metabolite network; glycolysis

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Post-transcriptional regulation through alternative splicing in the lungs of Tibetan pigs under hypoxia

Yang, Yanan; Yuan, Haonan; Yang, Qiaoli; Cai, Yuan; Zhao, Shengguo; Ren, Yue; Li, Yongqing; Gao, Caixia; SCI

机构： Gansu Agr Univ, Coll Anim Sci & Technol, Lanzhou, Gansu, Peoples R China; Acad Agr & Anim Husb Sci, Inst Anim Husb & Vet Med, Lhasa, Xizang, Peoples R China; Xinjiang Acad Anim Sci, Urumqi, Xinjiang, Peoples R China; Chinese Acad Agr Sci, Harbin Vet Res Inst, State Key Lab Vet Biotechnol, Harbin, Heilongjiang, Peoples R China;

关键词： Hypoxia; Tibetan pigs; AS; Cytokine-cytokine receptor interaction; Exon skip; Lung tissue

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Estimation of Cotton Nutrient Uptake Based on the QUEFTS Model in Xinjiang

Yibati, Halihashi; Zhang, Yan; Li, Qingjun; Xu, Xingpeng; He, Ping; SCI

机构： Xinjiang Acad Agr Sci XAAS, Inst Soil Fertilizer & Agr Water Conservat, Urumqi 830091, Peoples R China; Chinese Acad Agr Sci CAAS, Inst Agr Resources & Reg Planning, Beijing 100081, Peoples R China;

关键词： cotton; seed yield; QUEFTS model; nutrient uptake; internal efficiency (IE)

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Genome-Wide Association Analysis of Salt-Tolerant Traits in Terrestrial Cotton at Seedling Stage

Zheng, Juyun; Zhang, Zeliang; Gong, Zhaolong; Liang, Yajun; Sang, Zhiwei; Li, Xueyuan; Wang, Junduo; Zhang, Zeliang; Sang, Zhiwei; Xu, Yanchao; SCI

机构： Xinjiang Acad Agr Sci XAAS, Econ Crops Res Inst, Urumqi 830001, Peoples R China; Xinjiang Agr Univ, Coll Agr, Engn Res Ctr Cotton, Minist Educ, 311 Nongda East Rd, Urumqi 830052, Peoples R China; Chinese Acad Agr Sci ICR CAAS, Inst Cotton Res, State Key Lab Cotton Biol China, Anyang 455000, Peoples R China;

关键词： upland cotton; salt stress; SNP; GWAS; salt tolerance gene

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Integrative Analysis of the lncRNA-Associated ceRNA Regulatory Network Response to Hypoxia in Alveolar Type II Epithelial Cells of Tibetan Pigs

Yang, Yanan; Yuan, Haonan; Liu, Xuanbo; Jiao, Ting; Cai, Yuan; Zhao, Shengguo; Li, Yongqing; Ren, Yue; Gao, Caixia; Jiao, Ting; SCI

机构： Gansu Agr Univ, Coll Anim Sci & Technol, Lanzhou, Peoples R China; Xinjiang Acad Anim Sci, Urumqi, Peoples R China; Acad Agr & Anim Husb Sci, Inst Anim Husb & Vet Med, Lhasa, Peoples R China; Chinese Acad Agr Sci, Harbin Vet Res Inst, State Key Lab Vet Biotechnol, Harbin, Peoples R China; Gansu Agr Univ, Coll Grassland Sci, Lanzhou, Peoples R China;

关键词： hypoxia; ATII cells; swine; ceRNA network;

ssc-miR-20b/MSTRG.57127.1/ssc-miR-7-5p axis

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Whole-Genome Resequencing of Worldwide Wild and Domestic Sheep Elucidates Genetic Diversity, Introgression, and Agronomically Important Loci

Lv, Feng-Hua; Luo, Ling-Yun; Lu, Ran; Chen, Jian-Fei; Wang, Jian-Kui; Deng, Xue-Mei; Dehghani-Qanatqestani, Mostafa; Li, Meng-Hua; Cao, Yin-Hong; Salehian-Dehkordi, Hosein; Cao, Yin-Hong; Salehian-Dehkordi, Hosein; Liu, Guang-Jian; Liu, Ming-Jun; Li, Wen-Rong; Zhou, Ping; Wang, Xin-Hua; Shen, Min; Gao, Lei; Yang, Jing-Quan; Yang, Hua; Yang, Yong-Lin; Liu, Chang-Bin; Wan, Peng-Cheng; Zhang, Yun-Sheng; Pi, Wen-Hui; Zhou, Ping; Wang, Xin-Hua; Shen, Min; Gao, Lei; Yang, Jing-Quan; Yang, Hua; Yang, Yong-Lin; Liu, Chang-Bin; Wan, Peng-Cheng; Zhang, Yun-Sheng; Pi, Wen-Hui; Ren, Yan-Ling; Shen, Zhi-Qiang; Wang, Feng; Wang, Yu-Tao; Li, Jin-Quan; Hehua, Eer; Liu, Yong-Gang; Esmailizadeh, Ali; Dehghani-Qanatqestani, Mostafa; Charati, Hadi; Rushdi, Hossam E.; Nosrati, Maryam; Stepanek, Ondrej; Olsaker, Ingrid; Curik, Ino; Gorkhali, Neena A.; Paiva, Samuel R.; Caetano, Alexandre R.; Ciani, Elena; Amills, Marcel; Amills, Marcel; Weimann, Christina; Erhardt, Georg; Amane, Agraw; Amane, Agraw; Hanotte, Olivier; Mwacharo, Joram M.; Mwacharo, Joram M.; Mwacharo, Joram M.; Han, Jian-Lin; Han, Jian-Lin; Hanotte, Olivier; Periasamy, Kathiravan; Johansson, Anna M.; Hallsson, Jon H.; Kantanen, Juha; Coltman, David W.; Bruford, Michael W.; Bruford, Michael W.; Lenstra, Johannes A.; SCI

机构： China Agr Univ, Coll Anim Sci & Technol, Beijing, Peoples R China; Chinese Acad Sci, Inst Zool, CAS Key Lab Anim Ecol & Conservat Biol, Beijing, Peoples R China; Univ Chinese Acad Sci UCAS, Coll Life Sci, Beijing, Peoples R China; Novogene Bioinformat Inst, Beijing, Peoples R China; Xinjiang Acad Anim Sci, Anim Biotechnol Res Ctr, Urumqi, Peoples R China; Xinjiang Acad Agr & Reclamat Sci, Inst Anim Husb & Vet Med, Shihezi, Peoples R China; Xinjiang Acad Agr & Reclamat Sci, State Key Lab Sheep Genet Improvement & Hlth Prod, Shihezi, Peoples R China; Shandong Binzhou Acad Anim Sci & Vet Med, Binzhou, Peoples R China; Nanjing Agr Univ, Inst Sheep & Goat Sci, Nanjing, Peoples R China; Kashi Univ, Coll Life & Geog Sci, Kashi, Peoples R China; Inner Mongolia Agr Univ, Coll Anim Sci, Hohhot, Peoples R China; Ningxia Acad Agr & Forestry Sci, Grass Feeding Livestock Engn Technol Res Ctr, Yinchuan, Ningxia, Peoples R China; Yunnan Agr Univ, Coll Anim Sci & Technol, Kunming, Yunnan, Peoples R China; Shahid Bahonar Univ Kerman, Fac Agr, Dept Anim Sci, Kerman, Iran; Payame Noor Univ, Dept Agr, Tehran, Iran; State Vet Inst Jihlava, Dept Virol, Jihlava, Czech Republic; Cairo Univ, Fac Agr, Dept Anim Prod, Giza 12613, Egypt; Norwegian Univ Life Sci, Fac Vet Med, Dept Preclin Sci & Pathol, As, Norway; Univ Zagreb, Fac Agr, Dept Anim Sci, Zagreb, Croatia; Nepal Agr Res Council NARC, Natl Inst Anim Sci, Anim Breeding Div, Kathmandu, Nepal; PqEB, Embrapa Recursos Genet & Biotecnol, Parque Estacao Biol, Brasilia, DF, Brazil; Univ Bari Aldo 24 Moro, Dipartimento Biosci Biotecnol & Biofarmaceut, Bari, Italy; CSIC IRTA UAB UB, Ctr Res Agr Genom CRAG, Dept Anim Genet, Campus Univ Autonoma Barcelona, Bellaterra, Spain; Univ Autonoma Barcelona, Dept Anim Sci, Bellaterra, Spain; Justus Liebig Univ Giessen, Dept Anim Breeding & Genet, Giessen, Germany; Addis Ababa Univ, Dept Microbial Cellular & Mol Biol, Addis Ababa, Ethiopia; Int Livestock Res Inst, LiveGene Program, Addis Ababa, Ethiopia; Int Ctr Agr Res Dry Areas ICARDA, Small Ruminant Genom, Addis Ababa, Ethiopia; CTLGH, Roslin Inst Bldg,Easter Bush Campus, Edinburgh, Midlothian, Scotland; SRUC, Roslin Inst Bldg,Easter Bush Campus, Edinburgh, Midlothian, Scotland; Chinese Acad Agr Sci CAAS, Inst Anim Sci, CAAS ILRI Joint Lab Livestock & Forage Genet Reso, Beijing, Peoples R China; Int Livestock Res Inst ILRI, Livestock Genet Program, Nairobi, Kenya; Univ Nottingham, Sch Life Sci, Univ Pk, Nottingham, England; Int Atom Energy Agcy IAEA, Joint FAO IAEA Div, Anim Prod & Hlth Lab, Vienna, Austria; Swedish Univ Agr Sci, Fac Vet Med & Anim Sci, Dept Anim Breeding & Genet, Uppsala, Sweden; Agr Univ Iceland, Fac Nat Resources & Environm Sci, Borgarnes, Iceland; Nat Resources Inst Finland Luke, Prod Syst, Jokioinen, Finland; Univ Alberta, Dept Biol Sci, Edmonton, AB, Canada; Cardiff Univ, Sch Biosci, Cathays Pk, Cardiff, Wales; Cardiff Univ, Sustainable Places Res Inst, Cardiff, Wales; Univ Utrecht, Fac Vet Med, Utrecht, Netherlands;

关键词： whole-genome sequences; genetic diversity; adaptive introgression; genetic selection; agronomic traits; migration

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Comparison of the efficiency and precision of Base editor and CRISPR/Cas9 for inducing defined point mutation (S395F) in ovine embryos

Xu, Xin; Zhang, Xuemei; Peng, Xinrong; Li, Wenrong; Liu, Mingjun; Liu, Chunjie; SCI

机构： Xinjiang Univ, Coll Life Sci & Technol, Urumqi, Xinjiang, Peoples R China; Xinjiang Acad Anim Sci, Inst Anim Biotechnol, Urumqi 830026, Xinjiang, Peoples R China; Tarim Univ, Coll Anim Sci, Alar, Xinjiang, Peoples R China;

关键词： BE4-Gam; CRISPR; Cas9; GDF9; HDR; Point mutation

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Gene network analysis reveals candidate genes related with the hair follicle development in sheep

He, Junmin; Gun, Shuangbao; Zhao, Bingru; Huang, Xixia; Wu, Cuiling; Mao, Jingyi; Liu, Jing; Fu, Xuefeng; Tian, Yuezhen; Liu, Guifen; Tian, Kechuan; SCI

机构： Gansu Agr Univ, Coll Anim Sci & Technol, Lanzhou, Peoples R China; China Agr Univ, Coll Anim Sci & Technol, Beijing, Peoples R China; Xinjiang Agr Univ, Coll Anim Sci, Urumqi, Peoples R China; Xinjiang Acad Anim Sci, Key Lab Genet Breeding & Reprod Fine Wool Sheep &, Inst Anim Sci, Urumqi, Peoples R China; Shandong Acad Agr Sci, Inst Anim Sci & Vet Med, Jinan, Peoples R China;

关键词： Hair follicle; Merino sheep; RNA-seq; Differentially expressed genes; Network

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Whole-Genome Resequencing of Worldwide Wild and Domestic Sheep Elucidates Genetic Diversity, Introgression, and Agronomically Important Loci

Lv, Feng-Hua; Luo, Ling-Yun; Lu, Ran; Chen, Jian-Fei; Wang, Jian-Kui; Deng, Xue-Mei; Dehghani-Qanatqestani, Mostafa; Li, Meng-Hua; Cao, Yin-Hong; Salehian-Dehkordi, Hosein; Cao, Yin-Hong; Salehian-Dehkordi, Hosein; Liu, Guang-Jian; Liu, Ming-Jun; Li, Wen-Rong; Zhou, Ping; Wang, Xin-Hua; Shen, Min; Gao, Lei; Yang, Jing-Quan; Yang, Hua; Yang, Yong-Lin; Liu, Chang-Bin; Wan, Peng-Cheng; Zhang, Yun-Sheng; Pi, Wen-Hui; Zhou, Ping; Wang, Xin-Hua; Shen, Min; Gao, Lei; Yang, Jing-Quan; Yang, Hua; Yang, Yong-Lin; Liu, Chang-Bin; Wan, Peng-Cheng; Zhang, Yun-Sheng; Pi, Wen-Hui; Ren, Yan-Ling; Shen, Zhi-Qiang; Wang, Feng; Wang, Yu-Tao; Li, Jin-Quan; Hehua, Eer; Liu, Yong-Gang; Esmailizadeh, Ali; Dehghani-Qanatqestani, Mostafa; Charati, Hadi; Rushdi, Hossam E.; Nosrati, Maryam; Stepanek, Ondrej; Olsaker, Ingrid; Curik, Ino; Gorkhali, Neena A.; Paiva, Samuel R.; Caetano, Alexandre R.; Ciani, Elena; Amills, Marcel; Amills, Marcel; Weimann, Christina; Erhardt, Georg; Amane, Agraw; Amane, Agraw; Hanotte, Olivier; Mwacharo, Joram M.; Mwacharo, Joram M.; Mwacharo, Joram M.; Han, Jian-Lin; Han, Jian-Lin; Hanotte, Olivier; Periasamy, Kathiravan; Johansson, Anna M.; Hallsson, Jon H.; Kantanen, Juha; Coltman, David W.; Bruford, Michael W.; Bruford, Michael W.; Lenstra, Johannes A.; SCI

机构： China Agr Univ, Coll Anim Sci & Technol, Beijing, Peoples R China; Chinese Acad Sci, Inst Zool, CAS Key Lab Anim Ecol & Conservat Biol, Beijing, Peoples R China; Univ Chinese Acad Sci UCAS, Coll Life Sci, Beijing, Peoples R China; Novogene Bioinformat Inst, Beijing, Peoples R China; Xinjiang Acad Anim Sci, Anim Biotechnol Res Ctr, Urumqi, Peoples R China; Xinjiang Acad Agr & Reclamat Sci, Inst Anim Husb & Vet Med, Shihezi, Peoples R China; Xinjiang Acad Agr & Reclamat Sci, State Key Lab Sheep Genet Improvement & Hlth Prod, Shihezi, Peoples R China; Shandong Binzhou Acad Anim Sci & Vet Med, Binzhou, Peoples R China; Nanjing Agr Univ, Inst Sheep & Goat Sci, Nanjing, Peoples R China; Kashi Univ, Coll Life & Geog Sci, Kashi, Peoples R China; Inner Mongolia Agr Univ, Coll Anim Sci, Hohhot, Peoples R China; Ningxia Acad Agr & Forestry Sci, Grass Feeding Livestock Engn Technol Res Ctr, Yinchuan, Ningxia, Peoples R China; Yunnan Agr Univ, Coll Anim Sci & Technol, Kunming, Yunnan, Peoples R China; Shahid Bahonar Univ Kerman, Fac Agr, Dept Anim Sci, Kerman, Iran; Payame Noor Univ, Dept Agr, Tehran, Iran; State Vet Inst Jihlava, Dept Virol, Jihlava, Czech Republic; Cairo Univ, Fac Agr, Dept Anim Prod, Giza 12613, Egypt; Norwegian Univ Life Sci, Fac Vet Med, Dept Preclin Sci & Pathol, As, Norway; Univ Zagreb, Fac Agr, Dept Anim Sci, Zagreb, Croatia; Nepal Agr Res Council NARC, Natl Inst Anim Sci, Anim Breeding Div, Kathmandu, Nepal; PqEB, Embrapa Recursos Genet & Biotecnol, Parque Estacao Biol, Brasilia, DF, Brazil; Univ Bari Aldo 24 Moro, Dipartimento Biosci Biotecnol & Biofarmaceut, Bari, Italy; CSIC IRTA UAB UB, Ctr Res Agr Genom CRAG, Dept Anim Genet, Campus Univ Autonoma Barcelona, Bellaterra, Spain; Univ Autonoma Barcelona, Dept Anim Sci, Bellaterra, Spain; Justus Liebig Univ Giessen, Dept Anim Breeding & Genet, Giessen, Germany; Addis Ababa Univ, Dept Microbial Cellular & Mol Biol, Addis Ababa, Ethiopia; Int Livestock Res Inst, LiveGene Program, Addis Ababa, Ethiopia; Int Ctr Agr Res Dry Areas ICARDA, Small Ruminant Genom, Addis Ababa, Ethiopia; CTLGH, Roslin Inst Bldg,Easter Bush Campus, Edinburgh, Midlothian, Scotland; SRUC, Roslin Inst Bldg,Easter Bush Campus, Edinburgh, Midlothian, Scotland; Chinese Acad Agr Sci CAAS, Inst Anim Sci, CAAS ILRI Joint Lab Livestock & Forage Genet Reso, Beijing, Peoples R China; Int Livestock Res Inst ILRI, Livestock Genet Program, Nairobi, Kenya; Univ Nottingham, Sch Life Sci, Univ Pk, Nottingham, England; Int Atom Energy Agcy IAEA, Joint FAO IAEA Div, Anim Prod & Hlth Lab, Vienna, Austria; Swedish Univ Agr Sci, Fac Vet Med & Anim Sci, Dept Anim Breeding & Genet, Uppsala, Sweden; Agr Univ Iceland, Fac Nat Resources & Environm Sci, Borgarnes, Iceland; Nat Resources Inst Finland Luke, Prod Syst, Jokioinen, Finland; Univ Alberta, Dept Biol Sci, Edmonton, AB, Canada; Cardiff Univ, Sch Biosci, Cathays Pk, Cardiff, Wales; Cardiff Univ, Sustainable Places Res Inst, Cardiff, Wales; Univ Utrecht, Fac Vet Med, Utrecht, Netherlands;

关键词： whole-genome sequences; genetic diversity; adaptive introgression; genetic selection; agronomic traits; migration

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